Synopses & Reviews
Written by experienced experts in molecular modeling, this book describes the basics to the extent that is necessary to reliably judge the results from molecular modeling calculations.
Without unnecessary overhead it leads the reader from simple calculations on small molecules to the modeling of proteins and other relevant biomolecules. The beginner is guided through the first modeling experiment, and the routine user of modeling software provided with invaluable troubleshooting hints. A unique resource for students, researchers and lecturers, now available in all-new and enlarged edition.
“If currently popular ‘Dummies’ series of computer books were to publish a volume on molecular modeling this would be it” (Journal of the American Chemical Society)
“This book is well written and assumes no prior knowledge of molecular biology, statistical mechanics, or quantum chemistry. The authors provide practical hints for the application of the majority of available programs in computational chemistry” (Computers in Physics)
Review
"…detailed analysis of the steps involved in the molecular modeling process without delving too deeply into the complicated mathematical parameters that often seem to weigh down other texts." (
Journal of Chemical Education, June 2006)
"This book...is easy to read and provides useful information on almost all the available software in the field... In summary this is a highly recommended book for anyone who approaches, for the first time, the important field of bioinformatics." (ChemPhysChem)
"Summarizing, this textbook provides a very well taken, up-to-date introduction to the fascinating world of molecular modeling that comes at a moderate, affordable price. Its scope has been widened compared to the first edition, and the authors have succeeded in providing a didactic approach to the understanding of various modeling concepts. A job very well done! I can recommend it without hesitation." (ChemBioChem, 9/2004)
"In summary, this is an excellent introductory text for the rapidly evolving field of molecular modeling and computer-aided drug design. It includes numerous up-to-date and useful references." (Journal of Medicinal Chemistry, 2004, Vol. 47, No. 18)
Review
"Das vorliegende Buch ist ideal für jeden Wissenschafter oder fortgeschrittenen Studenten, der sich schnell über die Möglichkeiten der zur Verfügung stehenden Methoden des modernen Modelling informieren will." (Angew. Chemie)
Review
"If the currently popular 'Dummies' series of computer books were to publish a volume on molecular modeling this would be it" (J. Am. Chem. Soc.)
"The book is well written and assumes no prior knowledge of molecular biology, statistical mechanics, or quantum chemistry ... . The authors ... provide practical hints for the application of the majority of available programs in computational chemistry" (Computers in Physics)
"Of particular benefit to the novice modeller is the inclusion of a discussion of the limitations of several molecular modelling programs" (Scientific Computing World)
Synopsis
Written by experienced experts in molecular modeling, this books describes the basics to the extent that is necessary if one wants to be able to reliably judge the results from molecular modeling calculations.
Its main objective is the description of the various pitfalls to be avoided. Without unnecessary overhead it leads the reader from simple calculations on small molecules to the modeling of proteins and other relevant biomolecules.
A textbook for beginners as well as an invaluable reference for all those dealing with molecular modeling in their daily work!
About the Author
Hans-Dieter Höltjeis director of the Institute of Pharmaceutical Chemistry at the Heinrich-Heine-Universität Düsseldorf, where he also holds the chair of Medicinal Chemistry. His main interest is the molecular mechanism of drug action. He is especially interested in modeling G-Protein-Coupled receptors, cytochromes, enzymes of therapeutic importance and phospholipid membranes.
Wolfgang Sipplis Professor of Pharmaceutical Chemistry at the Martin-Luther-University of Halle-Wittenberg, Germany. He is interested in 3DQSAR, molecular docking and molecular dynamics, and their applications in drug design and pharmacokinetics.
Didier Rognanleads the Drug Bioinformatics Group at the Laboratory for Molecular Pharmacochemistry in Illkrich (France) He is mainly interested in all aspects (method development, applications) of protein-based drug design and virtual screening.
Gerd Folkersis Professor of Pharmaceutical Chemistry at the ETH Zurich. The focus of his research is the molecular interaction between drugs and their binding sites. Besides his work on the molecular mechanism of "conventional" nucleoside therapeutics against virus infection and cancer, his special interest has shifted to immuno-therapeutics.
Table of Contents
Preface.
1. Introduction.
2. Small Molecules.
3. A Case Study for Small Molecule Modeling: Dopamine D3Receptor Antagonists.
4. Introduction to Comparative Protein Modeling.
5. Protein-based Virtual Screening.
6. Scope and Limits of Molecular Docking.
7. Example for the Modeling of Protein & "Ligand Complexes: Antigen Presentation by MHC Class I.
Index.